nature-data
This skill helps draft and audit Data Availability statements for Nature journals and other publications.
Community author
- Agents
- Claude Code, Codex, Cursor, Gemini CLI, GitHub Copilot, OpenCode, claude.ai and API
- License
- Apache-2.0 (permissive)
- Pin
- 2a20e4apinned Oct 9, 2026
- Context cost
- about 870 tokenswhen the skill loads
- GitHub stars
- 46,641on yuan1z0825/nature-skills
- Scripts
- None found
What it does
“Draft or audit manuscript Data/Code Availability statements, dataset access routes, repository plans, and FAIR metadata. Use for 数据可用性声明、数据共享、数据仓库选择 and dataset citations; not general data cleaning or statistical analysis.”
Generated summary from the skill's own text
This skill helps draft and audit Data Availability statements for Nature journals and other publications. It guides authors through classifying datasets by access route, selecting appropriate repositories, adding formal citations, and checking FAIR metadata compliance. The skill handles journal-specific requirements, language preferences, and produces ready-to-submit statement text with explicit dataset-to-location mappings.
When to use it
- Preparing data-sharing statements for Nature journal submissions
- Auditing existing dataset availability claims for completeness
- Classifying datasets by access type and selecting repositories
- Adding formal dataset citations and FAIR metadata checks
When not to
- General data cleaning, processing, or statistical analysis tasks
- Selecting methods for data collection or experimental design
- Resolving disciplinary disagreements about what data must be shared
Install
These commands install from the publisher's repository and need no account.
skills CLI
npx skills add yuan1z0825/nature-skills --skill nature-dataInstalls from the repository's default branch, which may have changed since the commit we checked.
GitHub CLI 2.90 or later
gh skill install yuan1z0825/nature-skills nature-data@2a20e4a0868ef9094257cb5386cfe623454ae092Installs the commit we checked (2a20e4a).
Copy by hand
Download the folder at 2a20e4a and put it in .claude/skills/nature-data for Claude Code and in .agents/skills/nature-data for Codex, Cursor, Gemini CLI, GitHub Copilot and OpenCode.
Copy for your agent
A prompt for any coding agent. It installs this skill from GitHub at the pinned commit, copies the files as they are, and runs nothing unless you ask.
Prompt
Install the agent skill "nature-data" by Yuan1z0825. Source, pinned to commit 2a20e4a0868ef9094257cb5386cfe623454ae092: https://github.com/yuan1z0825/nature-skills/tree/2a20e4a0868ef9094257cb5386cfe623454ae092/skills/nature-data 1. Download that folder at exactly this commit. Do not use the default branch. 2. Copy every file unchanged, keeping the folder structure, into .claude/skills/nature-data/ for Claude Code and .agents/skills/nature-data/ for Codex, Cursor, Gemini CLI, GitHub Copilot and OpenCode. Create the folders if they do not exist. 3. Do not edit the files, and do not run any script in the folder unless I ask you to. 4. When you are done, list the files you copied and where you put them. Listing and checks: https://www.agentnative.dev/skills/yuan1z0825/nature-data
SKILL.md at the pin
--- name: nature-data description: "Draft or audit manuscript Data/Code Availability statements, dataset access routes, repository plans, and FAIR metadata. Use for 数据可用性声明、数据共享、数据仓库选择 and dataset citations; not general data cleaning or statistical analysis." metadata: author: Yuan1z skill, refactored into static/dynamic layers --- # Nature Data Availability — Router ## Routing protocol For a new task, load the core and matching resources below. Reuse already loaded guidance on follow-ups; load more only when the task needs it. ### 1. Load the manifest and the core layer Read [manifest.yaml](manifest.yaml). Then read every file listed under `always_load`: - `static/core/stance.md` — what the data-availability package is, the default stance, and the source hierarchy. - `static/core/workflow.md` — the eight-step workflow and the output format. ### 2. No content axis — confirm journal and language inline Unlike nature-writing or nature-figure, nature-data has no fragment axis. Its variation is handled at runtime, not by loading different content bodies: - **journal/article type** — if journal-specific instructions conflict with this skill, follow the journal. - **access route** — each dataset is classified into one route (public repository, controlled access, within paper, reused public, third-party restricted, justified request, or not applicable). - **user language** — if the user writes Chinese or requests Chinese guidance, read `static/core/chinese-mode.md` and add the 中文核对 block unless the user requested statement text only. ### 3. Run the workflow For a wording edit or audit of one existing statement, preserve supplied repository identifiers and access conditions and check the affected claims. Report gaps relevant to that statement; do not require a full study-wide dataset inventory or repository redesign. Use the complete workflow below for a new data-sharing plan, full statement, or submission audit. Follow the eight-step workflow in `core/workflow.md`: identify the journal, inventory every supporting dataset, classify each into one access route, choose repository and identifier strategy before drafting, draft the statement with explicit dataset-to-location mapping, add formal dataset citations, run the FAIR/metadata audit, and return ready-to-paste text plus unresolved fields. Do not invent DOIs, accession numbers, repository names, licences, embargo dates, ethics approvals, access committees, or data-use conditions. Flag "available upon request" as weak unless there is a specific legal, ethical, commercial, or third-party restriction. ### 4. Reach for references only when needed The files under `references/` are deep references, not defaults. Open them on demand per the `references.on_demand` table in the manifest — for example `references/policy-principles.md` for the governing rules and edge cases, `references/repository-and-identifiers.md` for repository/accession/DOI choices, `references/statement-patterns.md` for ready-to-adapt statements, `references/fair-metadata-checklist.md` for the FAIR audit, `references/chinese-author-alignment.md` for Chinese wording, and `references/source-basis.md` to justify a rule with its official source. When the target is the flagship journal Nature, also open `references/nature-article-requirements.md` for statement placement, mandatory-deposition routing, central-code review access, materials and structure-file checks. When the target is Nature Machine Intelligence, open `../nature-shared/journal-formats/nature-machine-intelligence.md`. Enforce a Data Availability statement and a separate `Code availability` section after it and before references; check reviewer access, precise restrictions, repository/identifier quality and the Software Submission Checklist for newly developed central code.
From yuan1z0825/nature-skills at 2a20e4a, shown as plain text under its license: Apache-2.0 (permissive). The license text is in LICENSE.
View SKILL.md on GitHub at 2a20e4aFiles
- SKILL.md3.9 KB · 4ef9c383411b
- README.md2.3 KB · 1aab4ad7731d
- README_EN.md2.5 KB · f536d49d982f
- agents/
- openai.yaml236 B · a371700ff5d1
- manifest.yaml2.4 KB · eb6fd2405975
- references/
- chinese-author-alignment.md5.0 KB · 31e315ea0911
- fair-metadata-checklist.md4.6 KB · 396170bc77a8
- nature-article-requirements.md5.1 KB · 3b38e4842e56
- policy-principles.md5.9 KB · 26f02aef5843
- repository-and-identifiers.md4.4 KB · da3ce50339c0
- source-basis.md5.4 KB · 46f726a79e7a
- statement-patterns.md8.1 KB · e10d26c2ba04
- static/
- core/
- chinese-mode.md1.2 KB · 9d3cda4ad60a
- stance.md1.9 KB · fe0829bd6d7d
- workflow.md1.9 KB · 51dfddc64063
15 files, 55 KB in total. Each file has a sha256 in the pin's manifest; the first 12 characters are shown.
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